Photosystem I P700 Chlorophyll A Apoprotein A1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-222   ILE-223  3.1 2.8 18.8 -14.1 57.3 57.0 0.6
 ILE-223   ASN-224  5.1 5.1 12.5 -3.4 86.2 96.1 -0.4
 ASN-224   LYS-225  7.4 7.1 24.6 -48.6 147.4 145.7 24.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-266   PHE-267  13.2 14.4 178.8 -36.1 126.5 156.5 181.9
 PHE-267   PHE-268  15.1 15.2 161.8 18.4 77.3 121.0 9.9
 PHE-268   THR-269  18.3 12.5 141.1 -162.8 26.3 115.3 -27.3
 THR-269   PHE-270  18.1 10.6 0.4 157.0 85.2 51.4 -130.4
 PHE-270   ASN-271  18.0 12.1 154.1 10.7 61.9 24.7 164.2
 ASN-271   TRP-272  14.7 11.4 -73.1 2.1 43.5 125.0 3.0
 TRP-272   ALA-273  14.1 14.2 134.0 145.1 80.9 78.7 -92.3
 ALA-273   ALA-274  12.6 13.3 22.5 -12.9 93.5 97.0 8.8
 ALA-274   TYR-275  9.2 9.7 177.2 -21.1 148.9 34.5 -24.8
 TYR-275   SER-276  8.9 7.3 -155.8 -80.7 79.1 80.4 233.1
 SER-276   ASP-277  10.3 3.6 -3.6 26.6 71.4 80.8 -9.9
 ASP-277   PHE-278  7.5 5.5 -169.8 -14.6 3.1 21.6 -171.5
 PHE-278   LEU-279  7.4 5.7 -10.3 -19.6 69.8 75.0 11.0
 LEU-279   THR-280  11.0 9.5 32.7 -42.6 64.0 57.1 2.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees