Beta-Agarase B
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-214
HIS-215
3.7
3.7
-10.4
14.4
98.7
99.2
83.1
HIS-215
VAL-216
5.0
5.0
-0.8
-2.1
29.6
30.1
26.3
VAL-216
PHE-217
6.2
6.1
-0.6
-2.1
105.9
105.8
-54.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-226
PRO-227
3.8
3.7
0.0
4.0
129.6
130.6
-153.1
PRO-227
LYS-228
1.6
1.4
-8.8
9.5
28.2
29.8
-215.6
LYS-228
ASP-229
1.5
1.5
-15.0
6.7
46.9
49.0
306.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-279
PHE-280
11.1
11.1
0.8
-0.9
105.4
106.8
-63.5
PHE-280
THR-281
10.2
10.1
-3.1
-5.3
22.4
23.4
143.5
THR-281
ASN-282
8.3
8.2
3.6
0.4
134.1
131.1
-21.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-288
THR-289
17.2
17.3
-1.8
-2.0
87.8
87.1
71.7
THR-289
GLU-290
16.5
16.3
0.7
-1.4
65.5
70.1
-14.3
GLU-290
ILE-291
19.7
19.6
-6.0
11.2
161.5
163.6
94.1
ILE-291
ASP-292
17.9
17.9
-16.1
15.6
91.6
91.9
-38.8
ASP-292
THR-293
14.7
14.8
-2.3
4.6
155.0
155.9
7.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees