Cytochrome P450-Cam

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-156   PRO-157  8.6 8.5 7.4 -1.0 71.5 71.9 -7.4
 PRO-157   PHE-158  9.0 8.9 7.2 -3.4 77.3 74.2 71.7
 PHE-158   PRO-159  5.8 5.6 6.8 3.7 22.5 18.0 10.3
 PRO-159   ILE-160  3.8 4.1 -4.2 -4.9 135.6 135.2 -3.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-226   GLN-227  5.9 5.8 -9.2 -10.8 26.7 20.5 124.1
 GLN-227   VAL-228  5.8 5.5 5.2 -3.8 76.7 84.8 4.9
 VAL-228   ASN-229  4.7 4.5 11.3 5.0 157.4 160.1 -149.6
 ASN-229   GLY-230  7.0 6.3 -18.4 13.2 47.2 47.0 98.7
 GLY-230   ARG-231  7.8 7.1 10.7 -17.7 107.4 102.3 17.0
 ARG-231   PRO-232  4.7 4.1 -13.8 8.8 144.2 149.0 -48.3
 PRO-232   ILE-233  4.2 4.3 -6.7 5.5 110.4 111.8 42.1
 ILE-233   THR-234  2.1 2.2 -3.7 -3.2 69.7 77.5 15.1
 THR-234   SER-235  4.6 4.8 -4.0 5.5 144.7 146.4 -11.2
 SER-235   ASP-236  7.8 7.8 4.7 1.1 57.4 63.0 26.4
 ASP-236   GLU-237  8.3 8.2 0.7 -7.3 124.1 126.1 29.5
 ASP-236   GLU-237  8.3 8.2 0.7 -7.3 124.1 126.1 29.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-236   GLU-237  8.3 8.2 0.7 -7.3 124.1 126.1 29.5
 ASP-236   GLU-237  8.3 8.2 0.7 -7.3 124.1 126.1 29.5
 GLU-237   ALA-238  5.1 5.0 4.9 3.2 147.9 144.7 -48.8
 ALA-238   LYS-239  4.8 4.7 -4.8 -4.8 47.8 40.6 76.9
 LYS-239   ARG-240  8.0 7.7 8.1 -1.7 120.0 116.9 -32.3
 ARG-240   MET-241  7.6 7.3 8.3 -12.4 129.6 126.4 0.6
 MET-241   CYS-242  4.2 3.9 9.8 -5.5 144.6 145.1 -21.1
 CYS-242   GLY-243  5.4 5.0 1.1 2.3 123.8 129.3 3.2
 GLY-243   LEU-244  8.3 7.6 -5.2 0.8 50.8 49.3 14.8
 LEU-244   LEU-245  6.7 6.0 2.2 0.1 138.6 131.0 -20.8
 LEU-245   LEU-246  3.8 2.9 8.6 -12.3 137.0 142.0 40.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-250   ASP-251  7.5 6.5 -45.1 65.7 125.7 124.1 100.4
 ASP-251   THR-252  9.0 9.5 -54.8 53.5 112.1 118.7 2.0
 THR-252   VAL-253  7.4 8.3 13.7 -3.4 26.4 35.0 69.4
 VAL-253   VAL-254  4.7 5.2 -9.6 -1.1 135.0 139.5 -84.2
 VAL-254   ASN-255  6.5 7.1 -1.8 -0.8 124.3 125.0 -24.4
 ASN-255   PHE-256  9.4 9.8 8.6 -11.4 58.6 65.4 -3.5
 PHE-256   LEU-257  8.3 8.6 -0.9 1.5 151.6 147.2 9.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees