4-Alpha-Glucanotransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-11   ASN-12  8.2 7.9 -0.3 1.8 155.6 152.3 2.2
 ASN-12   HIS-13  6.3 5.9 0.0 -4.4 87.0 85.9 15.9
 HIS-13   GLN-14  3.6 3.1 -9.3 12.7 140.9 139.3 54.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-22   PHE-23  5.5 5.3 -5.0 -3.0 114.3 113.5 -34.0
 PHE-23   GLU-24  2.3 1.9 -1.9 -0.4 51.2 53.0 11.8
 GLU-24   GLU-25  3.0 2.8 -0.1 0.2 92.3 92.0 -43.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-80   VAL-81  11.8 11.9 5.7 -8.7 141.5 142.5 52.4
 VAL-81   VAL-82  9.0 8.9 -3.5 -4.7 102.0 104.8 54.7
 VAL-82   ALA-83  6.2 6.0 10.9 -6.5 107.7 111.7 -26.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-86   GLU-87  5.6 5.4 4.7 -0.6 77.2 75.0 98.2
 GLU-87   PRO-88  3.3 3.5 1.4 1.0 60.6 57.3 -67.5
 PRO-88   VAL-89  6.2 6.2 -0.2 -3.8 135.6 132.1 -80.2
 VAL-89   LEU-90  6.8 6.8 1.0 0.1 42.7 39.8 36.4
 LEU-90   ALA-91  5.4 5.4 -1.6 4.1 136.8 136.5 23.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-105   LYS-106  8.4 8.2 2.0 -2.0 66.2 66.7 9.8
 LYS-106   ASP-107  10.6 10.5 7.2 3.5 117.6 120.1 -55.0
 ASP-107   TYR-108  13.5 13.4 -4.1 -1.1 22.1 30.5 88.9
 TYR-108   ALA-109  12.1 11.9 -8.3 11.2 91.3 97.0 5.1
 ALA-109   ARG-110  12.4 12.0 -11.9 11.2 97.1 95.0 -86.6
 ARG-110   LYS-111  15.8 15.4 3.6 -16.8 151.0 148.3 218.4
 LYS-111   LEU-112  16.6 16.3 17.2 -8.0 120.2 123.8 -179.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-116   LYS-117  12.2 11.9 -1.2 7.7 169.1 170.7 106.0
 LYS-117   GLY-118  11.4 11.4 -0.2 -3.6 97.1 97.3 -22.3
 GLY-118   VAL-119  9.0 8.9 -4.1 6.2 59.2 58.8 10.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-121   THR-122  4.7 4.4 -3.5 5.8 143.6 137.5 40.1
 THR-122   GLU-123  5.0 4.8 -10.0 5.0 77.9 72.8 48.3
 GLU-123   ARG-124  8.8 8.6 -4.3 -16.1 29.5 20.6 353.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-125   TRP-126  8.8 8.8 -7.6 9.4 143.0 145.4 102.0
 TRP-126   GLN-127  7.7 7.7 0.9 7.6 47.7 44.3 149.0
 GLN-127   PRO-128  7.4 7.4 9.8 -2.7 54.5 52.6 20.0
 PRO-128   GLU-129  5.2 5.4 -9.5 -5.4 92.0 95.0 17.7
 PRO-128   GLU-129  5.2 5.4 -9.5 -5.4 92.0 95.0 17.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-128   GLU-129  5.2 5.4 -9.5 -5.4 92.0 95.0 17.7
 PRO-128   GLU-129  5.2 5.4 -9.5 -5.4 92.0 95.0 17.7
 GLU-129   LEU-130  4.9 4.4 8.6 0.3 49.0 37.9 147.9
 LEU-130   VAL-131  2.4 2.5 10.7 -8.5 113.6 108.3 -15.4
 VAL-131   LYS-132  0.7 0.6 0.7 2.5 97.0 96.6 16.8
 LYS-132   SER-133  4.1 3.8 3.2 -4.4 32.5 30.4 0.6
 SER-133   LEU-134  5.3 4.9 -3.1 0.2 115.4 118.9 11.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-138   ILE-139  10.6 10.3 -0.8 -0.2 72.0 74.2 20.6
 ILE-139   GLU-140  8.3 8.0 -2.3 0.6 140.1 140.0 -45.6
 GLU-140   TYR-141  9.7 9.6 4.7 -2.2 90.4 91.7 90.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-166   ASP-167  3.8 3.9 4.5 -0.6 92.6 95.8 -31.7
 ASP-167   GLY-168  1.6 1.1 -6.2 -2.5 81.1 79.6 51.9
 GLY-168   GLY-169  3.0 2.8 2.2 -6.7 121.4 110.6 55.8
 GLY-169   GLU-170  2.2 3.2 17.1 1.9 57.9 43.1 178.5
 GLU-170   VAL-171  4.0 4.4 -8.2 -9.2 115.6 104.4 -187.6
 VAL-171   ILE-172  5.3 5.7 -12.4 5.7 156.4 158.5 -66.5
 ILE-172   THR-173  6.6 6.8 4.3 -5.8 79.2 82.0 -52.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-267   PRO-268  10.6 10.5 8.2 -12.9 88.5 88.6 22.2
 PRO-268   ILE-269  12.4 12.1 9.7 6.9 32.9 25.3 287.3
 ILE-269   ALA-270  12.1 12.1 13.8 1.8 46.7 54.4 121.4
 ALA-270   SER-271  13.5 13.3 14.3 -22.0 38.5 29.6 -130.6
 SER-271   TYR-272  12.7 12.7 -87.7 81.9 111.1 104.0 -44.1
 TYR-272   PHE-273  15.8 14.7 -3.3 -1.0 94.8 89.5 -63.9
 PHE-273   GLU-274  19.5 18.4 3.0 8.7 47.6 47.6 172.7
 GLU-274   MET-275  19.6 19.1 11.6 -12.7 99.8 96.6 3.0
 MET-275   SER-276  17.1 17.0 20.8 -1.2 131.0 131.3 -260.2
 SER-276   GLU-277  19.3 19.5 6.7 -6.5 67.6 63.6 54.5
 GLU-277   TRP-278  22.2 22.0 -2.0 -1.4 121.4 115.6 -7.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-441   HIS-442  27.4 27.5 7.0 -4.2 82.2 75.6 1.3
 HIS-442   TYR-443  28.7 28.5 4.3 -11.5 135.5 134.1 86.1
 TYR-443   HIS-444  27.5 27.8 7.7 -11.0 147.1 144.6 40.5
 HIS-444   GLU-445  29.7 30.0 153.4 -175.1 90.5 86.6 48.6
 GLN-469   ILE-470  31.6 32.4 19.0 -14.7 124.0 127.3 -80.0
 ILE-470   PRO-471  31.5 31.8 -3.8 -0.8 34.8 34.1 49.4
 PRO-471   GLU-472  32.4 32.8 -25.3 41.7 93.4 84.9 -129.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-623   LEU-624  25.8 25.9 8.3 -10.8 105.0 104.1 9.2
 LEU-624   SER-625  25.7 25.9 -19.4 19.4 102.6 104.4 -24.8
 SER-625   GLN-626  22.5 22.7 -4.0 -1.3 76.4 76.2 82.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-630   TRP-631  24.1 25.4 -13.4 -11.5 73.3 64.3 161.9
 TRP-631   ASP-632  25.4 25.8 14.6 1.3 47.6 48.4 161.3
 ASP-632   PHE-633  23.9 24.2 -7.9 5.0 60.9 63.3 39.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees