Phosphate-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-74   VAL-75  8.4 8.4 2.3 -18.5 122.6 126.2 51.1
 VAL-75   ILE-76  4.9 4.8 6.1 4.6 56.0 51.8 32.9
 ILE-76   GLY-77  1.3 1.2 -3.4 -18.2 68.7 64.8 36.2
 GLY-77   GLY-78  2.8 3.0 8.5 10.6 73.5 62.2 18.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-226   ALA-227  9.8 9.6 -6.1 -5.3 6.9 4.3 41.5
 ALA-227   ALA-228  8.4 8.4 21.9 -32.2 113.4 117.8 8.3
 ALA-228   LYS-229  7.6 7.3 32.8 -4.9 87.8 80.0 63.4
 LYS-229   GLY-230  11.2 10.9 6.0 -25.4 148.6 140.5 85.1
 GLY-230   ALA-231  12.0 12.4 30.6 6.2 151.9 134.3 -124.1
 ALA-231   ASP-232  10.5 9.9 -8.6 -39.4 75.6 81.8 38.7
 ASP-232   TRP-233  13.0 12.3 132.6 -132.0 69.7 92.4 -6.4
 TRP-233   SER-234  12.0 11.5 25.1 -10.6 114.8 118.0 -47.4
 SER-234   LYS-235  15.5 14.9 -130.1 -149.5 18.0 8.9 -267.0
 LYS-235   THR-236  15.0 13.5 -124.0 30.6 69.3 83.4 114.7
 THR-236   PHE-237  11.3 10.7 -125.6 -156.5 130.7 152.2 220.5
 PHE-237   ALA-238  9.8 8.9 10.8 -9.8 101.0 108.1 -23.6
 ALA-238   GLN-239  6.7 5.9 10.7 0.4 85.5 88.9 -26.0
 GLN-239   ASP-240  5.3 4.7 -0.6 2.8 102.7 90.0 -7.5
 ASP-240   LEU-241  3.2 3.2 -2.9 -18.8 131.8 134.1 -70.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-253   SER-254  4.8 5.0 16.0 -28.3 126.2 126.7 22.3
 SER-254   THR-255  1.7 1.7 -4.8 37.0 123.5 124.6 70.9
 THR-255   THR-256  2.3 2.3 13.6 -21.6 113.5 106.1 11.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees