Replication Factor C Subunit 4

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-166   SER-167  8.7 8.8 5.0 -0.7 60.8 61.3 102.2
 SER-167   ASP-168  11.8 11.9 4.9 -1.5 102.4 99.2 -71.1
 ASP-168   GLU-169  12.6 12.8 -7.3 -0.5 22.9 21.0 262.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-198   GLU-199  6.2 6.3 -3.2 0.1 69.6 69.1 40.5
 GLU-199   GLY-200  5.9 5.9 5.3 -2.6 45.4 45.5 52.7
 GLY-200   ASP-201  6.1 6.0 -3.2 1.9 117.9 118.4 -42.9
 ASP-201   MET-202  2.6 2.6 -2.2 -1.5 137.9 138.6 -134.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees