Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-60   SER-61  30.6 30.5 0.9 -2.8 70.0 70.0 -191.4
 SER-61   ARG-62  33.9 33.8 4.7 -0.2 40.4 39.3 202.0
 ARG-62   LYS-63  32.7 32.7 -3.0 4.0 137.7 138.1 19.1
 LYS-63   PRO-64  34.2 34.2 -1.8 -2.7 102.7 103.6 -14.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-183   ARG-184  34.7 34.6 5.2 -8.0 114.4 114.6 206.1
 ARG-184   LEU-185  34.5 34.3 -2.8 1.2 137.9 138.6 -68.4
 LEU-185   ASN-186  34.0 33.8 1.1 1.0 69.1 69.8 14.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-357   VAL-358  13.6 13.7 -0.5 -1.4 70.6 70.5 -75.2
 VAL-358   PHE-359  15.4 15.6 -1.3 0.9 60.9 59.9 -24.4
 PHE-359   ASP-360  17.0 17.1 -0.4 1.5 124.5 125.1 127.4
 ASP-360   THR-361  18.3 18.3 3.0 -6.1 61.2 61.4 -43.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-364   MET-365  24.2 24.2 -11.6 9.5 96.4 93.5 53.8
 MET-365   ALA-366  25.8 25.7 0.5 4.0 137.7 138.3 -58.0
 ALA-366   PRO-367  27.0 27.0 0.0 -3.1 77.9 81.0 185.8
 PRO-367   GLU-368  30.4 30.4 3.6 -1.8 132.5 133.2 -173.5
 GLU-368   ASN-369  30.8 30.7 0.5 2.9 162.4 163.0 -256.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-370   ILE-371  28.8 28.8 1.0 -0.5 157.2 155.8 -27.2
 ILE-371   TYR-372  27.1 27.1 2.5 -2.1 78.9 78.4 148.5
 TYR-372   LEU-373  23.4 23.4 0.2 -0.3 147.1 147.3 -137.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-378   THR-379  7.3 7.4 3.1 -1.9 121.9 120.9 -159.1
 THR-379   THR-380  9.9 10.0 0.3 1.8 64.2 63.8 83.8
 THR-380   ALA-381  12.2 12.3 2.3 -1.1 100.4 101.5 11.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-395   TYR-396  23.2 23.2 -1.5 1.4 32.1 32.4 -35.6
 TYR-396   PHE-397  21.7 21.7 4.4 -2.2 81.4 80.3 128.0
 PHE-397   CYS-398  18.1 18.1 -3.7 2.7 25.0 24.6 136.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-493   ALA-494  30.8 30.9 -3.5 2.1 88.1 88.9 136.7
 ALA-494   LEU-495  27.4 27.4 19.1 -14.5 151.9 153.6 -417.1
 LEU-495   LYS-496  25.0 24.9 -0.5 -3.0 94.1 96.7 190.6
 LYS-496   ALA-497  21.4 21.4 0.7 -1.5 113.3 117.9 92.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-508   GLU-509  27.3 27.3 -2.1 1.0 79.9 79.4 -121.2
 GLU-509   ALA-510  29.0 28.9 2.2 -4.9 166.4 167.2 198.2
 ALA-510   LEU-511  28.5 28.5 -0.6 -4.8 69.4 69.9 220.6
 LEU-511   SER-512  30.0 29.9 7.3 -16.8 74.4 77.2 -6.4
 SER-512   ALA-513  33.0 33.0 13.6 -0.8 114.4 106.4 -186.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees