Glutamate Receptor Ionotropic, Nmda 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-144
GLY-145
4.7
5.2
13.9
4.3
45.9
52.8
54.0
GLY-145
LEU-146
1.3
1.7
-0.5
-7.9
61.3
65.0
18.6
LEU-146
THR-147
2.4
2.1
-7.4
4.2
61.0
63.8
4.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-239
THR-240
7.7
7.7
-1.9
-6.2
13.9
14.5
22.9
THR-240
THR-241
6.8
7.0
9.1
95.8
111.7
116.4
-158.6
THR-241
GLY-242
9.7
9.3
167.2
21.4
174.2
87.6
574.5
GLY-242
GLU-243
10.6
8.4
121.7
1.8
115.0
152.3
-392.8
GLU-243
LEU-244
9.5
8.1
8.0
-21.4
101.1
109.1
18.4
LEU-244
PHE-245
5.7
5.0
-12.9
36.6
15.2
33.5
-96.1
PHE-245
PHE-246
4.6
5.6
-174.5
155.8
78.4
44.4
47.2
PHE-246
ARG-247
1.5
2.2
84.1
-42.4
60.7
64.3
92.6
ARG-247
SER-248
2.9
2.7
-11.7
9.2
68.0
71.8
11.7
SER-248
GLY-249
5.1
4.6
-18.6
11.0
129.6
124.1
-14.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees