Outer Membrane Protein Assembly Factor Bama

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 THR-423   GLY-424  22.4 22.8 171.5 171.0 161.1 159.5 36.6
 GLY-424   SER-425  22.6 21.3 45.5 -41.6 118.5 128.9 10.1
 SER-425   PHE-426  22.4 22.4 -17.6 -5.0 15.3 20.4 39.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ALA-442   GLY-443  18.1 18.4 21.6 -34.9 111.2 141.6 35.5
 GLY-443   VAL-444  17.2 17.8 -57.6 -27.0 58.7 38.2 148.2
 VAL-444   GLN-445  18.6 19.0 6.5 29.7 144.4 145.9 -27.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 VAL-456   GLY-457  14.0 14.2 -1.9 1.2 51.0 52.2 6.6
 GLY-457   ILE-458  13.9 14.1 -57.3 6.0 21.6 30.3 80.8
 ILE-458   ASN-459  13.8 13.9 22.8 -15.2 107.0 143.6 -1.8
 ASN-459   GLY-460  13.2 14.4 33.7 -50.7 142.4 149.6 51.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLU-470   LEU-471  8.3 9.3 -24.3 12.0 62.3 35.9 8.6
 LEU-471   SER-472  10.0 9.8 19.4 -25.2 149.0 141.5 44.2
 SER-472   VAL-473  9.2 9.2 -23.5 -8.1 44.6 36.1 50.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 VAL-480   ASP-481  8.0 7.7 -30.7 37.9 103.5 88.9 7.3
 ASP-481   GLY-482  4.5 4.1 -13.4 -12.6 46.1 47.7 20.7
 GLY-482   VAL-483  4.7 5.3 32.3 2.3 144.0 146.3 -72.9
 VAL-483   SER-484  2.8 4.0 -36.3 18.6 41.9 35.3 45.5
 SER-484   LEU-485  4.3 5.0 -74.6 46.4 48.1 31.8 42.5
 LEU-485   GLY-486  5.8 5.1 -20.4 -11.8 28.1 33.5 74.1
 GLY-486   GLY-487  4.7 5.0 -22.9 27.8 40.4 32.1 -13.7
 GLY-487   ARG-488  6.4 5.0 10.8 9.7 139.8 140.4 -23.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees