Alcohol Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alcohol Dehydrogenase
  Conformer 1
(PDB) 		4rqu (A)
  Conformer 2
(PDB) 		4rqu (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 210 0.53   7 - 105   108 - 111   117 - 178   297 - 301   330 - 337   346 - 377
2 161 0.57   106 - 107   112 - 116   179 - 296   302 - 329   338 - 345

Sequence


           _____________________________________________________________________________________________100_____________116________ 
 4rqu(A) : SQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGG 
         :                                                                                                                          
 4rqu(B) : SQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGG 
           _____________________________________________________________________________________________100_____________116________ 

           ___________________________________________________178__________________________________________________________________ 
 4rqu(A) : MIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECV 
         :                                                                                                                          
 4rqu(B) : MIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECV 
           ___________________________________________________178__________________________________________________________________ 

           _________________________________________________296______________________________329____336______345___________________ 
 4rqu(A) : NPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDY 
         :                                                                                                                          
 4rqu(B) : NPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDY 
           _________________________________________________296______________________________329____336______345___________________ 

           _______________                                                                                                          
 4rqu(A) : MLKGESIRCIITMGA                                                                                                          
         :                                                                                                                          
 4rqu(B) : MLKGESIRCIITMGA                                                                                                          
           _______________                                                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		6.7
Translation
(A) 		0.0
Closure
(%) 		73.6
Bending Residues
( green ) 		  100 - 112
  116 - 117
  178 - 179
  296 - 303
  329 - 330
  336 - 339
  345 - 346
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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