Isoform 4 Of Tyrosine-Protein Phosphatase Non-Receptor Type Substrate 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Isoform 4 Of Tyrosine-Protein Phosphatase Non-Receptor Type Substrate 1
  Conformer 1
(PDB) 		9tf5 (A)
  Conformer 2
(PDB) 		9sic (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 60 0.37   5 - 10   21 - 38   59 - 78   91 - 109
2 47 0.32   11 - 20   39 - 58   79 - 90   110 - 114

Sequence


           _________10________20________________38__________________58__________________78__________90________________109_________  
 9tf5(A) : SEEELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAK**  
         :                                                                                                                          
 9sic(B) : *EEELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNAKEGHFPRVTTVS---kRENMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPS  
           _________10________20________________38__________________58__________________78__________90________________109_________  

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		3.7
Translation
(A) 		0.0
Closure
(%) 		90.1
Bending Residues
( green ) 		  10 - 11
  20 - 22
  38 - 39
  58 - 59
  78 - 79
  90 - 91
  109 - 110
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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