Licb Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Licb Protein
  Conformer 1
(PDB) 		7paf (A)
  Conformer 2
(PDB) 		7b0k (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 209 1.48   8 - 85   107 - 142   169 - 288
2 40 2.9   86 - 106   143 - 168

Sequence


           ______________________________________________________________________________85__________________106___________________ 
 7paf(A) : GVPFGLLSGIFWGLGLTVSAYIFSIFTDLSPFVVAATHDFLSIFILLAFLLVKEGKVRLSIFLNIRNVSVIIGALLAGPIGMQANLYAVKYIGSSLASSVSAIYPAISVLLAFFFLKHKI 
         :                                                                                                                          
 7b0k(A) : GVPFGLLSGIFWGLGLTVSAYIFSIFTDLSPFVVAATHDFLSIFILLAFLL-------------iRNVSVIIGALLAGPIGMQANLYAVKYIGSSLASSVSAIYPAISVLLAFFFLKHKI 
           ______________________________________________________________________________85__________________106___________________ 

           ______________142_________________168___________________________________________________________________________________ 
 7paf(A) : SKNTVFGIVLIIGGIIAQT-sFYIGILCALVCAIAWGSESVLSSFAMESELSEIEALLIRQVTSFLSYLVIVLFSHQSFTAVANGQLLGLMIVFAAFDMISYLAYYIAINRLQPAKATGL 
         :                                                                                                                          
 7b0k(A) : SKNTVFGIVLIIGGIIAQTYKVyIGILCALVCAIAWGSESVLSSFAMESELSEIEALLIRQVTSFLSYLVIV------------gQLLGLMIVFAAFDMISYLAYYIAINRLQPAKATGL 
           ______________142_________________168___________________________________________________________________________________ 

           ________________________________________                                                                                 
 7paf(A) : NVSYVVWTVLFAVVFLGAPLDMLTIMTSLVVIAGVYIII*                                                                                 
         :                                                                                                                          
 7b0k(A) : NVSYVVWTVLFAVVFLGAPLDMLTIMTSLVVIAGVYIIIK                                                                                 
           ________________________________________                                                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		27.9
Translation
(A) 		0.0
Closure
(%) 		93.8
Bending Residues
( green ) 		  85 - 86
  106 - 107
  142 - 143
  168 - 169
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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