Phosphoribosylglycinamide Formyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphoribosylglycinamide Formyltransferase
  Conformer 1
(PDB) 		1mej (B)
  Conformer 2
(PDB) 		1meo (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 103 0.69   15 - 19   25 - 29   102 - 102   104 - 198
2 90 0.77   3 - 14   20 - 24   30 - 101   103 - 103

Sequence


           ___________12_____19________29_____________________________________________________________________101__________________ 
 1mej(B) : RILVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSN 
         :                                                                                                                          
 1meo(A) : *ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSN 
           ___________12_____19________29_____________________________________________________________________101__________________ 

           ______________________________________________________________________________________                                   
 1mej(B) : AHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWV*****                                   
         :                                                                                                                          
 1meo(A) : AHEQALETGVTVTGCTVHFVAE---aGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWVKEEHH                                   
           ______________________________________________________________________________________                                   

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		8.0
Translation
(A) 		0.6
Closure
(%) 		82.4
Bending Residues
( green ) 		  12 - 15
  19 - 26
  29 - 30
  101 - 104
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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